| Name | Elevation | Prominence | Isolation | State | Counties | Quadrangle | Image | Report |
| Cleveland National Forest HP | 6,299' | 279' | 0.84 | CA | San Diego | Mount Laguna | | |
| Monument Peak | 6,271' | 331' | 3.81 | CA | San Diego | Monument Peak | | |
| Wooded Hill | 6,223' | 243' | 2.37 | CA | San Diego | Mount Laguna | | |
| Stephenson Peak | 6,220' | 240' | 1.17 | CA | San Diego | Monument Peak | | |
| "Hays Peak" | 6,180' | 120' | 0.38 | CA | San Diego | Monument Peak | | |
| Palomar Mountain | 6,144' | 2,858' | 13.50 | CA | San Diego | Palomar Observatory | | |
| Piñon Point | 6,020' | 80' | 1.55 | CA | San Diego | Mount Laguna | | |
| Garnet Peak | 5,900' | 480' | 3.22 | CA | San Diego | Monument Peak | | |
| Sheephead Mountain | 5,896' | 556' | 3.88 | CA | San Diego | Mount Laguna | | |
| 5868 | 5,868' | 368' | 2.16 | CA | San Diego | Monument Peak | | |
| 5764 | 5,764' | 504' | 1.65 | CA | San Diego | Monument Peak | | |
| 5700 | 5,700' | 280' | 1.10 | CA | San Diego | Monument Peak | | |
| 5696 | 5,696' | 396' | 3.28 | CA | San Diego | Boucher Hill | | |
| Santiago Peak | 5,689' | 4,391' | 34.92 | CA | Orange & Riverside | Santiago Peak | | |
| Gordon Point | 5,660' | 550' | 2.01 | CA | San Diego | Boucher Hill | | |
| Pine Mountain | 5,660' | 160' | 0.78 | CA | San Diego | Monument Peak | | |
| 5629 | 5,629' | 314' | 0.59 | CA | San Diego | Boucher Hill | | |
| Manza Benchmark | 5,556' | 256' | 2.06 | CA | San Diego | Mount Laguna | | |
| Modjeska Peak | 5,510' | 581' | 0.85 | CA | Orange | Santiago Peak | | |
| 5460 | 5,460' | 360' | 1.97 | CA | San Diego | Mount Laguna | | |
| 5460 | 5,460' | 360' | 0.64 | CA | San Diego | Hot Springs Mountain | | |
| 5340 | 5,340' | 280' | 1.85 | CA | San Diego | Mount Laguna | | |
| 5243 | 5,243' | 383' | 4.32 | CA | San Diego | Cuyamaca Peak | | |
| 5101 | 5,101' | 321' | 1.80 | CA | San Diego | Cuyamaca Peak | | |
| Aguanga Mountain | 5,100' | 160' | 4.09 | CA | San Diego | Palomar Observatory | ||
| Agua Tibia Wilderness HP | 5,100' | 0' | 1.53 | CA | San Diego | Vail Lake | | |
| Eagle Crag | 5,077' | 57' | 1.76 | CA | San Diego | Vail Lake | | |
| Cliff Benchmark | 5,069' | 489' | 2.44 | CA | San Diego | Mount Laguna | ||
| 4938 | 4,938' | 388' | 1.79 | CA | San Diego | Palomar Observatory | ||
| Long Valley Peak | 4,900' | 840' | 2.87 | CA | San Diego | Descanso | | |
| Guatay Mountain | 4,885' | 865' | 3.38 | CA | San Diego | Descanso | | |
| 4860 | 4,860' | 320' | 0.98 | CA | San Diego | Descanso | | |
| 4823 | 4,823' | 403' | 2.61 | CA | San Diego | Mount Laguna | ||
| Los Pinos Mountain | 4,805' | 825' | 5.07 | CA | San Diego | Morena Reservoir | | |
| Agua Tibia Mountain | 4,779' | 848' | 3.90 | CA | San Diego | Vail Lake | | |
| 4760 | 4,760' | 380' | 1.31 | CA | San Diego | Descanso | | |
| 4737 | 4,737' | 437' | 1.03 | CA | San Diego | Mount Laguna | | |
| Pine Hills | 4,730' | 240' | 2.80 | CA | San Diego | Palomar Observatory | ||
| 4660 | 4,660' | 280' | 1.23 | CA | San Diego | Mount Laguna | ||
| Corte Madera Mountain | 4,657' | 677' | 1.77 | CA | San Diego | Descanso | | |
| Buckman Benchmark | 4,641' | 501' | 2.20 | CA | San Diego | Descanso | | |
| Trabuco Peak | 4,604' | 817' | 3.44 | CA | Orange & Riverside | Alberhill | | |
| Los Pinos Peak | 4,540' | 640' | 2.59 | CA | Orange | Alberhill | | |
| 4540 | 4,540' | 360' | 1.22 | CA | San Diego | Descanso | | |
| 4485 | 4,485' | 305' | 0.64 | CA | San Diego | Mount Laguna | ||
| Rocky Mountain | 4,460' | 320' | 1.03 | CA | San Diego | Warner Springs | | |
| 4460 | 4,460' | 280' | 1.59 | CA | Orange | Santiago Peak | | |
| Corte Benchmark | 4,424' | 404' | 1.36 | CA | San Diego | Descanso | | |
| 4390 | 4,390' | 290' | 0.98 | CA | San Diego | Morena Reservoir | ||
| 4382 | 4,382' | 402' | 0.99 | CA | San Diego | Cameron Corners | | |
| 4340 | 4,340' | 440' | 2.07 | CA | San Diego | Descanso | | |
| 4313 | 4,313' | 333' | 1.44 | CA | Orange | Alberhill | | |
| 4300 | 4,300' | 440' | 0.83 | CA | San Diego | Descanso | ||
| Viejas Mountain | 4,187' | 1,647' | 8.09 | CA | San Diego | Viejas Mountain | | |
| "Bronco Peak" | 4,169' | 389' | 2.19 | CA | San Diego | Morena Reservoir | | |
| 4159 | 4,159' | 436' | 4.61 | CA | San Diego | Santa Ysabel | | |
| Black Mountain | 4,051' | 761' | 3.48 | CA | San Diego | Mesa Grande | | |
| 4030 | 4,030' | 370' | 1.06 | CA | San Diego | Cameron Corners | | |
| 4029 | 4,029' | 289' | 0.66 | CA | San Diego | Santa Ysabel | ||
| 4020 | 4,020' | 293' | 3.42 | CA | San Diego | Warner Springs | ||
| Pleasants Peak | 4,007' | 627' | 6.39 | CA | Orange & Riverside | Corona South | | |
| 3975 | 3,975' | 355' | 2.28 | CA | San Diego | Warner Springs | ||
| Oak Benchmark | 3,965' | 305' | 1.12 | CA | San Diego | Santa Ysabel | | |
| 3947 | 3,947' | 279' | 1.04 | CA | San Diego | Cameron Corners | | |
| Bald Peak | 3,947' | 127' | 2.53 | CA | Orange & Riverside | Corona South | | |
| Morena Butte | 3,919' | 699' | 2.46 | CA | San Diego | Morena Reservoir | | |
| Poser Mountain | 3,917' | 497' | 2.01 | CA | San Diego | Viejas Mountain | | |
| Pine Mountain | 3,913' | 133' | 0.87 | CA | San Diego | Warner Springs | ||
| 3907 | 3,907' | 287' | 1.26 | CA | Orange | Alberhill | | |
| 3860 | 3,860' | 360' | 3.17 | CA | Orange | Corona South | | |
| 3848 | 3,848' | 348' | 0.86 | CA | San Diego | Cameron Corners | | |
| Gaskill Peak | 3,836' | 1,216' | 7.41 | CA | San Diego | Barrett Lake | | |
| Bedford Peak | 3,807' | 278' | 0.64 | CA | Orange & Riverside | Corona South | | |
| 3791 | 3,791' | 451' | 1.00 | CA | San Diego | Cameron Corners | ||
| 3785 | 3,785' | 285' | 2.92 | CA | San Diego | Vail Lake | ||
| 3769 | 3,769' | 389' | 0.98 | CA | Riverside | Corona South | | |
| Lyons Peak | 3,740' | 1,400' | 3.76 | CA | San Diego | Dulzura | | |
| 3740 | 3,740' | 320' | 2.38 | CA | Orange | Santiago Peak | | |
| Sill Hill | 3,740' | 80' | 2.18 | CA | San Diego | Tule Springs | ||
| Lamina Benchmark | 3,738' | 358' | 2.05 | CA | San Diego | Viejas Mountain | | |
| El Cajon Mountain | 3,679' | 1,974' | 6.60 | CA | San Diego | El Cajon Mountain | | |
| Lawson Peak | 3,660' | 400' | 1.04 | CA | San Diego | Barrett Lake | | |
| 3641 | 3,641' | 311' | 1.47 | CA | San Diego | Mesa Grande | | |
| 3623 | 3,623' | 403' | 1.14 | CA | San Diego | Morena Reservoir | | |
| Elsinore Mountains (HP) | 3,591' | 931' | 6.35 | CA | Riverside | Sitton Peak | | |
| Elsinore Peak | 3,575' | 435' | 2.25 | CA | Riverside | Wildomar | | |
| 3539 | 3,539' | 479' | 2.86 | CA | San Diego | Tule Springs | ||
| 3500 | 3,500' | 400' | 2.34 | CA | Orange | Alberhill | | |
| Mineral Hill | 3,495' | 235' | 1.58 | CA | San Diego | Tule Springs | ||
| Bell Bluff | 3,409' | 429' | 1.23 | CA | San Diego | Viejas Mountain | | |
| 3380 | 3,380' | 280' | 4.07 | CA | San Diego | Vail Lake | ||
| Elena Mountain | 3,339' | 679' | 2.17 | CA | San Diego | Barrett Lake | | |
| Sugarloaf | 3,326' | 546' | 2.70 | CA | Orange | Alberhill | | |
| Rock Mountain | 3,299' | 439' | 1.32 | CA | San Diego | El Cajon Mountain | | |
| Wild Horse Peak | 3,277' | 137' | 2.63 | CA | Riverside | Vail Lake | | |
| Sitton Peak | 3,273' | 773' | 3.86 | CA | Riverside | Sitton Peak | | |
| "Boy Scout Peak" | 3,260' | 440' | 0.59 | CA | Riverside | Sitton Peak | | |
| Red Top | 3,260' | 200' | 3.15 | CA | San Diego | Barrett Lake | ||
| Barber Mountain | 3,257' | 357' | 0.85 | CA | San Diego | Barrett Lake | | |
| Eagle Peak | 3,228' | 528' | 2.62 | CA | San Diego | Tule Springs | | |
| "Sugarloaf" | 3,227' | 247' | 0.60 | CA | Orange | Alberhill | | |
| Sunshine Mountain | 3,180' | 320' | 1.80 | CA | San Diego | Tule Springs | | |
| Lillian Hill | 3,180' | 240' | 1.33 | CA | San Diego | Tule Springs | ||
| Horsethief Ridge | 3,140' | 80' | 2.31 | CA | San Diego | Viejas Mountain | ||
| 3106 | 3,106' | 286' | 2.18 | CA | Riverside | Alberhill | | |
| Gower, Mount | 3,103' | 433' | 3.74 | CA | San Diego | Ramona | | |
| 3102 | 3,102' | 362' | 2.06 | CA | San Diego | Viejas Mountain | | |
| 3073 | 3,073' | 319' | 1.35 | CA | Riverside | Sitton Peak | | |
| 3060 | 3,060' | 520' | 2.08 | CA | San Diego | Barrett Lake | ||
| Sierra Peak | 3,045' | 355' | 4.59 | CA | Orange & Riverside | Black Star Canyon | | |
| Miller Mountain | 2,953' | 903' | 3.94 | CA | San Diego | Sitton Peak | | |
| 2903 | 2,903' | 763' | 2.07 | CA | Riverside | Wildomar | ||
| 2780 | 2,780' | 280' | 2.31 | CA | San Diego | Barrett Lake | ||
| Black Benchmark | 2,710' | 400' | 3.08 | CA | Orange | Black Star Canyon | ||
| Sawyer Benchmark | 2,692' | 352' | 4.06 | CA | Riverside | Vail Lake | ||
| Middle Ridge | 2,682' | 346' | 1.87 | CA | San Diego | Mesa Grande | | |
| 2610 | 2,610' | 340' | 2.37 | CA | Orange | Black Star Canyon | | |
| 2605 | 2,605' | 455' | 2.90 | CA | San Diego | Ramona | | |
| 2588 | 2,588' | 518' | 1.85 | CA | San Diego | Margarita Peak | ||
| 2580 | 2,580' | 440' | 1.75 | CA | Riverside | Vail Lake | | |
| Echo Mountain | 2,535' | 275' | 1.62 | CA | San Diego | Barrett Lake | ||
| 2500 | 2,500' | 360' | 2.27 | CA | Riverside | Wildomar | ||
| 2500 | 2,500' | 280' | 2.51 | CA | Orange | Sitton Peak | ||
| 2493 | 2,493' | 393' | 2.05 | CA | San Diego | Barrett Lake | | |
| 2420 | 2,420' | 320' | 2.69 | CA | Orange | Santiago Peak | | |
| 2370 | 2,370' | 406' | 1.32 | CA | San Diego | Tule Springs | | |
| Middle Mountain | 2,362' | 182' | 0.91 | CA | San Diego | Viejas Mountain | ||
| 2340 | 2,340' | 280' | 2.06 | CA | San Diego | Sitton Peak | ||
| 2310 | 2,310' | 290' | 3.66 | CA | San Diego | Margarita Peak | ||
| 2301 | 2,301' | 361' | 1.71 | CA | Orange | Black Star Canyon | | |
| Vulture Crags | 2,300' | 49' | 0.36 | CA | Orange | Santiago Peak | | |
| 2180 | 2,180' | 280' | 2.01 | CA | San Diego | El Cajon Mountain | | |
| 2130 | 2,130' | 360' | 3.75 | CA | San Diego | Rodriguez Mountain | | |
| 2050 | 2,050' | 350' | 2.28 | CA | Orange | Canada Gobernadora | | |
| 1952 | 1,952' | 382' | 2.80 | CA | San Diego | Ramona | | |
| 1940 | 1,940' | 600' | 1.73 | CA | San Diego | Alpine | | |
| Barona Mesa | 1,940' | 40' | 1.97 | CA | San Diego | El Cajon Mountain | | |
| Orosco Ridge | 1,890' | 500' | 1.14 | CA | San Diego | San Pasqual | | |
| 1590 | 1,590' | 300' | 0.95 | CA | Orange | Canada Gobernadora | |