| # | Name | Elevation | Prominence | Counties | Quadrangle | Repeats |
| 1 | Black Elk Peak | 7,242' | 2,932' | Pennington | Custer | |
| 2 | Odakota Mountain | 7,199' | 1,327' | Pennington | Ditch Creek | |
| 3 | Bear Mountain | 7,168' | 457' | Pennington | Berne | |
| 4 | 7139 | 7,139' | 526' | Pennington | Crooks Tower | |
| 5 | Crooks Tower | 7,134' | 173' | Lawrence | Crooks Tower | x1 |
| 6 | Terry Peak | 7,070' | 1,012' | Lawrence | Lead | |
| 7 | "Sylvan Peak" | 7,001' | 769' | Custer | Custer | |
| 8 | Custer Peak | 6,804' | 654' | Lawrence | Minnesota Ridge | |
| 9 | Weston County HP | 6,630' | 0' | Pennington & Weston | Buckhorn | |
| 10 | 6167 | 6,167' | 507' | Pennington | Silver City | |
| 11 | Cicero Peak | 6,166' | 503' | Custer | Cicero Peak | |
| 12 | 6070 | 6,070' | 570' | Pennington | Silver City | |
| 13 | Coolidge, Mount | 6,023' | 683' | Custer | Mount Coolidge | |
| 14 | Negro Hill | 5,940' | 40' | Lawrence | Tinton | |
| 15 | Elk Mountains (HP) | 5,669' | 839' | Custer | Clifton | |
| 16 | Meade County HP | 5,470' | 180' | Meade | Deadman Mountain | |
| 17 | Iron Mountain | 5,445' | 265' | Pennington | Iron Mountain | |
| 18 | Whitewood Peak | 5,140' | 240' | Lawrence | Deadwood North | |
| 19 | Crook Mountain | 4,940' | 530' | Lawrence | Deadwood North | |
| 20 | Parker Peak | 4,848' | 683' | Fall River | Minnekahta | |
| 21 | Pilger Mountain | 4,795' | 525' | Custer | Burdock | |
| 22 | Elkhorn Peak | 4,540' | 560' | Lawrence | Deadwood North | |
| 23 | Lookout Peak | 4,478' | 578' | Lawrence | Spearfish | |
| 24 | 4433 | 4,433' | 573' | Lawrence | Jolly | |
| 25 | Bear Butte | 4,426' | 1,251' | Meade | Fort Meade | |
| 26 | Battle Mountain | 4,405' | 300' | Fall River | Hot Springs | |
| 27 | Brakes Benchmark | 4,050' | 260' | Butte | Beulah | |
| 28 | Harding Peak | 4,019' | 629' | Harding | Gustave | |
| 29 | East Short Pine Hills | 4,010' | 600' | Harding | Bog Creek | |
| 30 | Bell Benchmark | 3,718' | 303' | Oglala Lakota | Pine Ridge | |
| 31 | Slim Buttes | 3,672' | 582' | Harding | Irish Butte | |
| 32 | Bennett County HP | 3,638' | 103' | Bennett | Two Lance Lake | |
| 33 | 3635 | 3,635' | 310' | Harding | Irish Butte | |
| 34 | Jackson County HP | 3,494' | 33' | Jackson | Kyle NE | |
| 35 | Todd County HP | 3,309' | 0' | Bennett & Todd | Iron Shell Flat West | |
| 36 | Pinnacles, The | 3,255' | 525' | Pennington | Wall SW | x1 |
| 37 | Perkins County HP | 3,174' | 99' | Perkins | Sorum | |
| 38 | Haakon County HP | 2,835' | 160' | Haakon | Grindstone | |
| 39 | Mellette County HP | 2,830' | 60' | Mellette | Norris | |
| 40 | Thunder Butte | 2,742' | 301' | Ziebach | Glad Valley SW | |
| 41 | Thunder Hawk Butte | 2,715' | 110' | Corson | Thunder Hawk | |
| 42 | Tripp County HP | 2,649' | 99' | Tripp | Witten SW | |
| 43 | White Clay Butte | 2,516' | 231' | Jones | Murdo | |
| 44 | Lantry Benchmark | 2,461' | 46' | Dewey | High Elk Hill | |
| 45 | Stanley County HP | 2,381' | 192' | Stanley | Whiteman Ranch | |
| 46 | Gregory County HP | 2,365' | 70' | Gregory | Paxton | |
| 47 | Medicine Butte | 2,262' | 497' | Lyman | Reliance | |
| 48 | Walworth County HP | 2,235' | 390' | Walworth | Lowry NW | |
| 49 | Potter County HP | 2,225' | 320' | Potter | Gettysburg | |
| 50 | Hyde County HP | 2,205' | 500' | Hyde | Macs Corner | |
| 51 | Rocky Benchmark | 2,197' | 232' | Hand | Macs Corner NE | |
| 52 | McPherson County HP | 2,185' | 70' | McPherson | Wolff Lake | |
| 53 | Roberts County HP | 2,135' | 838' | Roberts | Summit NE | |
| 54 | Campbell County HP | 2,135' | 410' | Campbell | Selby NW | |
| 55 | Charles Mix County HP | 2,128' | 441' | Charles Mix | Dixon NE | |
| 56 | Edmunds County HP | 2,115' | 50' | Edmunds | Bowdle-Hosmer Lake | |
| 57 | Bijou Hills | 2,105' | 270' | Brule | Bijou Hills | |
| 58 | Punished Womans Mound | 2,085' | 160' | Codington | South Shore | |
| 59 | Marshall County HP | 2,085' | 120' | Marshall | South Red Iron Lake | |
| 60 | Sully Buttes | 2,083' | 226' | Sully | Okobojo | |
| 61 | Jerauld County HP | 2,065' | 270' | Jerauld | Cottonwood Lake | |
| 62 | Grant County HP | 2,065' | 90' | Grant | Still Lake NE | |
| 63 | Hughes County HP | 2,055' | 50' | Hughes | Chapelle Lake SW | |
| 64 | Deuel County HP | 2,045' | 180' | Deuel | Bemis | |
| 65 | Day County HP | 2,045' | 10' | Day | Drywood Lakes | |
| 66 | Waters Hill | 2,035' | 180' | Faulk | Rezac Lake NE | |
| 67 | Buffalo County HP | 2,025' | 40' | Buffalo | Mittelstedt Slough | |
| 68 | Aurora County HP | 2,009' | 230' | Aurora | Isham Lake | |
| 69 | Brookings County HP | 1,995' | 20' | Brookings | Astoria | |
| 70 | Hamlin County HP | 1,955' | 10' | Hamlin | Kranzburg SW | |
| 71 | Leonard Benchmark | 1,951' | 366' | Charles Mix | Lake Andes NW | |
| 72 | Clark County HP | 1,935' | 170' | Clark | Baileys Lake | |
| 73 | Bon Homme County HP | 1,905' | 358' | Bon Homme | Oak Hollow | |
| 74 | Hutchinson County HP | 1,905' | 20' | Hutchinson | Oak Hollow | |
| 75 | Kingsbury County HP | 1,895' | 90' | Kingsbury | Erwin | |
| 76 | Beadle County HP | 1,885' | 50' | Beadle | Wessington Springs NW | |
| 77 | Lake County HP | 1,875' | 183' | Lake | Oldham SE | |
| 78 | McCook County HP | 1,875' | 130' | McCook | Lake Madison SW | |
| 79 | 1870 | 1,870' | 405' | Charles Mix | Fort Randall Dam | |
| 80 | Minnehaha County HP | 1,825' | 60' | Minnehaha | Buffalo Trading Post | |
| 81 | Miner County HP | 1,805' | 90' | Miner | Oldham NW | |
| 82 | Douglas County HP | 1,805' | 0' | Charles Mix, Douglas, & Hutchinson | Oak Hollow | |
| 83 | Moody County HP | 1,785' | 50' | Moody | Elkton | |
| 84 | Turner County HP | 1,745' | 303' | Turner | Freeman SE | |
| 85 | Davison County HP | 1,697' | 113' | Davison | Old Stickney Lake | |
| 86 | Yankton County HP | 1,685' | 60' | Yankton | Turkey Ridge | |
| 87 | 1655 | 1,655' | 300' | Yankton | Tabor NE | |
| 88 | Moe Benchmark | 1,565' | 250' | Lincoln | Alcester NW | |
| 89 | Union County HP | 1,545' | 50' | Union | Beresford | |
| 90 | Brown County HP | 1,527' | 30' | Brown | Frederick NW | |
| 91 | Clay County HP | 1,505' | 150' | Clay | Irene | |
| 92 | Bald Mountain | 1,480' | 155' | Spink | Redfield SW | |
| 93 | Hanson County HP | 1,427' | 10' | Hanson | Canova SE | |
| 94 | Sanborn County HP | 1,375' | 0' | Sanborn | Artesian NE |